BIDSvuedemos Tutorials About Download

Open-source neuroimaging workflow

Curate BIDS data
with precision.

BIDSvue transforms raw neuroimaging data into curated archives that you can explore to fix errors, strip identifiable features, and publish to the cloud.

Tutorials

Learn by doing.

Practical protocols for moving real neuroimaging data from acquisition to a validated, shareable BIDS dataset.

MRIDICOMDe-identifyShare

Convert ReproIn MRI to BIDS

Turn a folder of ReproIn-named DICOMs into a validated, de-identified, shareable BIDS dataset.

~15 min Start
MEGMNE-BIDSDe-identifyShare

From MEG to BIDS

Use the MNE-BIDS plug-in to create, edit, and share a BIDS dataset.

~15 min Start
PETPET2BIDSEditShare

Convert PET to BIDS

Use PET2BIDS to create, edit, and share a BIDS dataset.

~15 min Start
DataLadCloneTimeseriesDashboard

Explore a DataLad dataset

Clone a huge remote dataset and fetch only the files you need.

~15 min Start
MRSDICOMSpectra

View MRS

Convert Magnetic Resonance Spectroscopy (MRS) DICOMs and read the metabolite peaks in the spectrum.

~15 min Start
MRIDICOMPhysioAI

Embedded physiological recordings

Import and inspect physiological measures acquired with MRI.

~15 min Start

Under the hood

Proven tools,
one clear workflow.

BIDSvue brings established open-source projects into one inspectable workflow. The underlying tools remain visible, attributable, and independently useful.

dcm2niix DICOM → NIfTI/BIDS conversion, including ReproIn naming. bids-validator-rs A fast Rust implementation of the BIDS validator. niimath CPU defacing and the mindgrab mask-dilation pass. mindgrab Brainchop model powering robust brain extraction. NiiVue WebGL neuroimaging visualization for the preview pane. DataLad Distributed datasets via a native, in-binary datalad-rs engine. Dcm2Bids Configurable DICOM-to-BIDS organization. heudiconv Heuristic-driven DICOM conversion. mne-bids MEG / EEG / fNIRS import (.fif / .edf / .bdf / .snirf). ezbids MEG-to-BIDS conversion. PET2BIDS Import PET data into BIDS. BIDSvue Orchestrate BIDS conversion, curation, and viewing.